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The Top 10 Lot Tracking Software You Should Use

Here’s my shortlist of the best lot tracking software:

Lot tracking: thrilling stuff, right? Okay, maybe not—but if you’ve ever been knee-deep in a product recall or scrambling to meet compliance requirements, you know just how mission-critical it really is.

Whether you’re managing perishable goods, pharmaceuticals, or chemical components, traceability isn’t optional. 

It's the difference between a smooth operation and a full-blown logistics nightmare. And let’s be honest—managing this manually in a spreadsheet from 2011 is a fast track to burnout.

That’s where lot tracking software comes in. 

These tools give you the visibility, compliance support, and real-time data you need to keep your business running clean and audit-ready.

These tools give you the visibility, compliance support, and real-time data you need to keep your business running clean and audit-ready—especially when managing expiry dates, finished goods, and strict food safety standards.

I’ve reviewed and compared the best lot tracking systems on the market, so you can skip the vendor rabbit holes and zero in on what actually works.

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Comparing the Best Lot Tracking Software, Side-by-Side

Not all lot tracking tools are created equal—and neither are their price tags. This table gives you a bird’s-eye view of the top software on my list, including costs and use cases—whether you’re looking for all-in-one systems, specific inventory tracking modules, or tools with strong order management features.

The 10 Best Lot Tracking Software, Reviewed

Here’s where we get into the good stuff. Below, you’ll find detailed reviews of each platform that made the cut. I cover features, ideal use cases, integrations, and everything else you need to know—minus the marketing fluff.

Best for quick setup

  • Free demo available
  • From $99/month
Visit Website
Rating: 4.7/5

Finale Inventory is a cloud-based lot tracking software designed for businesses that need a quick setup and efficient inventory management. It caters to small and medium-sized businesses, helping you manage stock levels, orders, and shipments.

Why I picked Finale Inventory: It's ideal for teams that need to get started quickly without a long onboarding process. The software offers barcode scanning to speed up inventory counts and order processing. With its real-time stock updates, you can avoid overstocking or running out of products. Finale Inventory also provides low-stock alerts to keep your inventory in check.

Standout features & integrations:

Features include barcode scanning for faster inventory counts, real-time stock updates to avoid overstocking, and low-stock alerts to help manage inventory levels efficiently.

Integrations include Shopify, QuickBooks, ShipStation, Amazon, WooCommerce, eBay, Etsy, Xero, BigCommerce, and Magento.

Pros and cons

Pros:

  • Low-stock alerts
  • Supports barcode scanning
  • Real-time inventory updates
  • Quick setup process

Cons:

  • Requires internet connection
  • Basic user interface
  • Limited advanced features

Best for small businesses

  • 30-day free trial
  • From $64.95/month
Visit Website
Rating: 3.6/5

SOS Inventory is a lot tracking software designed for small businesses seeking detailed product traceability. It serves industries like food and pharmaceuticals, helping you manage inventory and regulatory compliance.

Why I picked SOS Inventory: It's tailored for small businesses needing a straightforward solution. The software allows you to assign lot numbers and generate automated reports. Its user-friendly interface and integration with QuickBooks make it accessible for teams without extensive technical expertise. SOS Inventory also offers serial number tracking, which is crucial for equipment management.

Standout features & integrations:

Features include automated reporting for easy compliance, lot number assignment to track products efficiently, and serial number tracking for equipment management.

Integrations include QuickBooks, Shopify, WooCommerce, Amazon, eBay, Square, Etsy, ShipStation, Xero, and Salesforce.

Pros and cons

Pros:

  • Detailed serial number tracking
  • Barcode scanning supported
  • User-friendly interface
  • Easy QuickBooks integration

Cons:

  • Requires an internet connection
  • Limited customer support hours
  • No offline access

Best for batch processing

  • Free demo available
  • Pricing available upon request
Visit Website
Rating: 3.6/5

BatchMaster is an ERP software tailored for process manufacturing industries such as food, beverage, chemicals, and life sciences. It helps businesses manage batch production, compliance, and quality control efficiently.

Why I picked BatchMaster: It's designed to handle batch processing, which is crucial for industries like food and chemicals. The software provides features for batch production and quality management. Compliance support ensures you meet industry regulations, while mobile warehousing enhances inventory management. BatchMaster also offers cloud hosting to support diverse operational needs.

Standout features & integrations:

Features include batch production to manage manufacturing processes, quality management for maintaining high standards, and mobile warehousing to enhance inventory management on the go.

Integrations include SAP, QuickBooks, Microsoft Dynamics, Sage, Shopify, WooCommerce, Amazon, eBay, Salesforce, and Xero.

Pros and cons

Pros:

  • Compliance support
  • Quality management tools
  • Supports batch processing
  • Tailored for process manufacturing

Cons:

  • May be too complex for small businesses
  • Requires training for new users
  • Complex setup process

Best for handmade sellers

  • 14-day free trial
  • From $24/month

Craftybase is a tracking software tailored to handmade sellers and small-scale manufacturers. It helps you manage inventory, track production costs, and easily ensure compliance.

Why I picked Craftybase: It's perfect for handmade sellers who need to track materials and costs accurately. The software provides detailed cost breakdowns and material usage reports, which are crucial for small businesses. Batch tracking is another feature that supports makers in maintaining quality control. Craftybase also offers expense tracking, allowing you to keep a close eye on your finances.

Standout features & integrations:

Features include detailed cost breakdowns to help you understand expenses, batch tracking for maintaining quality control, and expense tracking to monitor your finances effectively.

Integrations include Etsy, Shopify, WooCommerce, Square, PayPal, BigCommerce, Xero, QuickBooks Online, Amazon, and eBay.

Pros and cons

Pros:

  • Supports batch tracking
  • Easy material usage reports
  • Detailed production cost tracking
  • Tailored for small-scale producers

Cons:

  • Limited customer support options
  • Basic reporting features
  • Limited scalability for large businesses

Best for cloud deployment

  • Free demo available
  • Pricing available upon request

Acumatica ERP is a cloud-based enterprise resource planning software designed for small to medium-sized businesses across various industries. It helps manage financials, distribution, and project accounting efficiently.

Why I picked Acumatica ERP: It's perfect for businesses seeking a cloud deployment solution with flexibility. Acumatica provides unlimited user access, which is a unique feature for growing teams. The software offers real-time visibility into operations, enhancing decision-making. Its modular architecture allows you to add features as your business needs evolve.

Standout features & integrations:

Features include unlimited user access for growing teams, real-time visibility into operations for informed decision-making, and modular architecture to expand features as needed.

Integrations include Salesforce, HubSpot, Avalara, Magento, Shopify, BigCommerce, Smartsheet, DocuSign, Box, and Adobe Sign.

Pros and cons

Pros:

  • Real-time operational visibility
  • Modular architecture
  • Flexible cloud deployment
  • Unlimited user access

Cons:

  • Limited offline capabilities
  • Requires technical expertise
  • Complex configuration process

Best for global compliance

  • Free demo available
  • Pricing upon request

SAP Business One is an ERP solution tailored for small to medium-sized enterprises, focusing on managing financials, sales, and operations. It serves businesses across various industries, offering tools to streamline processes and enhance decision-making.

Why I picked SAP Business One: It's designed for companies operating globally, ensuring compliance with international standards. The software provides localized solutions for different markets, which is critical for multinational operations. Its real-time analytics help you make informed business decisions. Additionally, SAP Business One offers integrated business intelligence to analyze data effectively.

Standout features & integrations:

Features include real-time analytics to support decision-making, integrated business intelligence for effective data analysis, and localized solutions for global operations.

Integrations include Microsoft Excel, Microsoft Outlook, Shopify, Salesforce, Magento, QuickBooks, HubSpot, Mailchimp, PayPal, and eBay.

Pros and cons

Pros:

  • Scalable for growing businesses
  • Integrated business intelligence
  • Localized solutions for various markets
  • Supports global compliance needs

Cons:

  • Limited customization options
  • Requires technical knowledge
  • Complex setup process

Best for chemical industry

  • Free demo available
  • Pricing available upon request

Datacor ERP is an enterprise resource planning software tailored for the chemical industry, focusing on improving operational efficiency and compliance. It helps you manage inventory, production, and quality control to ensure smooth operations.

Why I picked Datacor ERP: It caters to the unique needs of chemical manufacturers, offering features like formulation management and compliance tracking. These tools help you maintain product quality and meet industry regulations. The software's batch tracking ensures traceability, which is crucial for safety and compliance. Additionally, its robust reporting tools provide valuable insights into your operations.

Standout features & integrations:

Features include formulation management for precise product creation, compliance tracking to meet industry standards, and robust reporting tools for valuable insights.

Integrations include QuickBooks, Microsoft Dynamics, Salesforce, SAP, Oracle, Sage, Shopify, WooCommerce, Amazon, and eBay.

Pros and cons

Pros:

  • Batch tracking for traceability
  • Compliance tracking tools
  • Supports formulation management
  • Tailored for the chemical industry

Cons:

  • May be too specialized for some
  • Requires industry knowledge
  • Complex setup process

Best for ecommerce

  • Free consultation available upon request
  • Pricing available upon request

Shipfusion is a fulfillment and lot tracking software tailored for ecommerce businesses that need efficient logistics and inventory management. It helps you manage orders, track shipments, and ensure accurate inventory levels.

Why I picked Shipfusion: It's perfect for ecommerce companies that require reliable order fulfillment and tracking. Shipfusion offers real-time inventory updates, which are crucial for managing stock levels effectively. Its lot tracking capabilities ensure you can trace products accurately, reducing the risk of errors. Additionally, Shipfusion provides detailed reporting to help you analyze your fulfillment performance.

Standout features & integrations:

Features include real-time inventory updates to manage stock efficiently, lot tracking to trace products accurately, and detailed reporting for performance analysis.

Integrations include Shopify, WooCommerce, Magento, Amazon, eBay, BigCommerce, Walmart, Etsy, Square, and QuickBooks.

Pros and cons

Pros:

  • Ideal for ecommerce
  • Accurate lot tracking
  • Detailed performance reporting
  • Reliable order fulfillment

Cons:

  • Limited offline access
  • Complex onboarding process
  • Requires integration setup

Best for scalability

  • Free demo available
  • From $199/month

SYSPRO is an ERP software designed for manufacturers and distributors who need scalable solutions for their operations. It helps you manage inventory, orders, and production processes efficiently.

Why I picked SYSPRO: It's ideal for businesses that plan to grow and need a scalable solution. SYSPRO offers flexible deployment options, including cloud and on-premise, to suit your business needs. The software provides detailed lot traceability, which is essential for compliance and quality control. Additionally, its customizable dashboards give you a clear view of your operations.

Standout features & integrations:

Features include flexible deployment options to fit your business model, detailed lot traceability for compliance, and customizable dashboards to monitor operations efficiently.

Integrations include Microsoft Dynamics, Salesforce, SAP, QuickBooks, Oracle, Xero, Shopify, WooCommerce, Amazon, and eBay.

Pros and cons

Pros:

  • Customizable dashboards
  • Detailed traceability features
  • Flexible deployment options
  • Scalable for growing businesses

Cons:

  • Limited mobile access
  • Requires extensive training
  • Complex system configuration

Other Lot Tracking Software

Here are some additional lot tracking software options that didn’t make it onto my shortlist, but are still worth checking out:

  1. Katana MRP

    For manufacturers

  2. Wasp InventoryCloud

    For easy integration

  3. Sage X3

    For process manufacturing

  4. MRPeasy

    For small manufacturers

  5. ShipBob

    For fulfillment centers

  6. Elevated Signals

    For cannabis producers

  7. FOYCOM

    For mid-sized manufacturers

  8. Deacom ERP

    For batch production control

  9. Recipal

    For small food businesses

  10. Odoo

    For modular flexibility

  11. Think Aisle

    For shelf life management

  12. Oracle NetSuite ERP

    For global scalability

  13. Oracle Fusion Cloud Order Management

    For integrated finance functions

  14. FlexiBake

    For food industry compliance

Our Selection Criteria For Lot Tracking Software

When evaluating lot tracking software, I didn’t just look for fancy dashboards and buzzwords. I focused on what actually matters when you’re managing real inventory in the real world—like compliance, traceability, and whether the support team ghosts you post-implementation. 

Here's how I scored each tool:

Core functionality (25% of total score)

The software had to nail the basics of lot tracking. If it couldn’t do this well, it didn’t make the list.

  • Track and assign lot numbers across your supply chain
  • Generate traceability reports with minimal effort
  • Monitor inventory levels in real-time or near-real-time with strong inventory control and FIFO tracking options
  • Support compliance and recall management processes

Additional standout features (25% of total score)

Some tools go beyond the basics—and those extra features can make a big difference when you're juggling production, compliance, and a thousand SKUs.

  • Real-time analytics to spot issues before they become disasters
  • Mobile access for managing inventory on the go
  • Customizable alerts that keep your team proactive, not reactive
  • Integrations with IoT devices and sensors for automated data capture
  • Advanced reporting and business intelligence tools

Usability (10% of total score)

If your team hates using it, it won’t get used—end of story.

  • Clean, intuitive UI that doesn’t require an instruction manual
  • Clear navigation and logical workflows
  • Low learning curve for getting started fast
  • ​​Reduces human error with clean interfaces and guided workflows
  • Responsive design that plays nicely on any device

Onboarding (10% of total score)

No one has time for a six-month setup or “DIY” documentation.

  • Access to training videos and onboarding walkthroughs
  • Helpful templates and best-practice setups
  • Interactive product tours that actually show you what to do
  • Webinars and onboarding calls that aren't just thinly-veiled sales pitches

Customer support (10% of total score)

Because when things break (and they will), you want help fast.

  • 24/7 or extended support availability
  • Responsive live chat, email, and/or phone support
  • Rich knowledge bases that are actually helpful
  • Personalized support options for more complex setups

Value for money (10% of total score)

The best tools offer serious ROI—without surprise fees or overkill features you’ll never use.

  • Pricing that makes sense for the features offered
  • Transparent pricing structures—no “contact us” required
  • Free trials so you can test-drive before you commit
  • Discounts for longer-term plans or growing teams

Customer reviews (10% of total score)

I dig into real user feedback to see how these tools hold up after the honeymoon phase.

  • Overall satisfaction and loyalty indicators
  • Ease-of-use ratings from teams on the ground
  • Comments on customer support and issue resolution
  • Insights into real-world performance and reliability

What is Lot Tracking Software?

Lot tracking software is what keeps your inventory from turning into a compliance nightmare. 

It tracks batches of products across your entire supply chain, from raw materials to finished products, giving you traceability software that actually works.

This software is essential for industries where traceability isn’t just nice to have—it’s the law. Think food, pharmaceuticals, chemicals, or anything that might need to be recalled, audited, or double-checked for quality control.

Today’s top lot tracking platforms go beyond basic batch numbers.

They use real-time analytics, barcode scanning, AI-driven forecasting, and even blockchain to make inventory management smarter, faster, and way less risky.

Whether you're managing expiration dates or meeting FDA regulations, lot tracking software gives you the tools to stay compliant, improve quality, and keep your supply chain from spiraling.

How to Choose the Right Lot Tracking Software

Choosing the right lot tracking software shouldn’t feel like decoding a warehouse inventory spreadsheet from 2003. Here’s a clear checklist to help you stay focused and find a tool that won’t let you down when things get real.

FactorWhat to look for
ScalabilityCan the software handle more products, users, and complexity as your business grows? Don’t just think about now—think 12 months from now.
IntegrationsWill it play nice with your existing ERP, accounting, CRM, or shipping tools? If it can’t connect, it’ll just create more work.
CustomizabilityCan you tailor dashboards, reports, and workflows to your actual process—not what the vendor thinks your process should be?
Ease of useIs the interface clean, modern, and not buried under a decade of tech debt? Your team should be able to use it without a 40-page manual.
BudgetWhat’s the total cost—setup, licenses, support, training, extras? Don’t get caught off guard by add-ons and per-user fees.
Security safeguardsAre your data and audit trails protected with encryption, backups, and access controls? Compliance doesn't mean much if your system's a security risk.
Compliance featuresDoes it help you actually meet the rules? Automated alerts, audit logs, and documentation are non-negotiable in regulated industries.
Support servicesCan you get help when you need it? Live chat, a decent help center, and real humans on the other end are critical for go-time issues.

Features of Lot Tracking Software

Not all features are created equal. These are the ones that separate a decent system from one that actually makes your life easier.

  • Real-time analytics. Gives you up-to-the-minute insights so you can make smarter inventory decisions fast.
  • Blockchain technology. Ensures product authenticity with an immutable record of where each batch has been and when.
  • AI-driven insights. Uses historical and real-time data to forecast demand, spot anomalies, and optimize stock levels.
  • Compliance tracking. Automatically logs activity, generates audit reports, and flags non-compliant items before they become a problem.
  • Barcode scanning. Speeds up inventory counts and updates while reducing manual entry errors.
  • Customizable alerts. Notifies your team of low stock, expiring lots, or any red flags you’d rather know about before it hits the fan.
  • Lot traceability. Tracks the full journey of each product batch—ideal for audits, recalls, or customer complaints.
  • Mobile access. Lets your team manage inventory on the warehouse floor, not just behind a desk.
  • Sustainability features. Helps track and report environmental metrics like carbon footprint or waste reduction.
  • Integration capabilities. Connects with your ERP, accounting, or ecommerce platforms to streamline operations—especially helpful for managing purchase orders and syncing your full inventory system.

Benefits of Lot Tracking Software

Lot tracking software is the operational backbone for businesses that can’t afford slip-ups. Here’s what the right system actually does for you:

  • Improves traceability. Know exactly where every batch came from and where it went—no guesswork, no chaos when something goes wrong.
  • Boosts compliance. Automates the documentation and tracking you need to stay on the right side of industry regulators (and sleep at night).
  • Streamlines inventory management. Real-time data and AI inventory insights help you avoid overstocking, understocking, and the dreaded "we thought we had more of that.
  • Increases transparency. Blockchain and detailed logs give customers and stakeholders proof that your process is clean, compliant, and audit-ready.
  • Saves serious time. Barcode scanning, mobile tools, and alerts mean fewer spreadsheets, fewer meetings, and less time chasing down “where did that go?”
  • Reduces costs. Smarter inventory means less waste, fewer recalls, and no more surprise write-offs because something expired in a back corner.
  • Supports sustainability. Tracks waste, emissions, and usage data to help you hit your eco goals (and maybe even impress a few investors).

Costs & Pricing of Lot Tracking Software

Lot tracking software pricing is all over the map. Some tools keep it simple with user-based pricing. Others want you to “book a demo” just to find out if they’re in your budget. 

Here’s a breakdown of what you can generally expect—plus a few watch-outs.

Plan typeAverage priceCommon featuresBest for
Free plan$0Basic tracking, limited support, and minimal reportingSolo operators or early-stage startups
Personal plan$10–$30/user/monthStandard tracking, basic analytics, email-only supportSmall businesses with basic needs
Business plan$50–$100/user/monthAdvanced tracking, real-time analytics, mobile access, and priority supportGrowing teams needing full functionality
Enterprise plan$150–$300/user/monthCustom workflows, advanced compliance tools, dedicated support, full integrationsLarge or regulated businesses

Additional pricing notes

  • Setup and onboarding fees. Some vendors charge extra for initial implementation, training, or custom integrations. Ask upfront.
  • Per-location or per-lot fees. Keep an eye out for these if you’re managing multiple warehouses or high-volume SKUs.
  • Feature gating. Not every “enterprise feature” is included in the lower tiers—make sure the plan you pick does what you actually need.

Lot Tracking Software FAQs

Here are some answers to common questions about lot tracking software:

How does lot tracking work?

Lot tracking groups products into batches and assigns each a unique identifier (a lot number). As those batches move through your supply chain—from receiving to production to sale—the software logs every step. That way, if you need to trace an issue or recall a product, you’re not flying blind.

What’s the difference between lot tracking and serial tracking?

Lot tracking monitors batches of items made at the same time with shared characteristics (like expiration dates). Serial tracking assigns a unique ID to every individual unit. Use lot tracking for perishable goods and compliance. Use serial tracking for high-value, one-off items like electronics or machinery.

Is lot tracking the same as batch tracking?

Pretty much. The terms are often used interchangeably. That said, “lot” usually emphasizes compliance and traceability, while “batch” leans toward manufacturing and production control. Either way, you’re grouping and tracking product units across the supply chain.

Can lot tracking software help with product recalls?

Absolutely—and that’s one of its biggest strengths. Good software lets you trace affected lots fast, figure out where they went, and act before a small issue becomes a full-blown crisis. The faster your response, the fewer customers (and regulators) you’ll have breathing down your neck.

Is this software scalable for a growing business?

Yes—as long as you choose wisely. Most modern systems are built to handle increasing SKUs, locations, and user roles. Just make sure the tool doesn’t cap your data limits or gouge you as your team grows.

Who actually uses lot tracking software?

It’s not just for supply chain managers. These tools are used by compliance officers, warehouse leads, production teams, quality control, and even finance. Anyone responsible for traceability, audits, or operational accuracy benefits from having solid lot data at their fingertips.

Lot Tracking isn’t Exciting, But Doing It Right Is

Look, lot tracking software isn’t going to win any design awards or make your ops team do a happy dance (unless they’re into that). 

But it will save your business from costly recalls, regulatory headaches, and the nightmare of manually tracing inventory across spreadsheets and emails.

With the right system, you get clear visibility, airtight compliance, and fewer late-night fire drills when something goes sideways. Now that you’ve seen the best tools out there, the only thing left is to pick the one that won’t make you regret your decision six months from now.

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Sean Flannigan
By Sean Flannigan

Sean is the Senior Editor for The Retail Exec. He's spent years getting acquainted with the retail space, from warehouse management and international shipping to web development and ecommerce marketing. A writer at heart (and in actuality), he brings a deep passion for great writing and storytelling to retail topics big and small.